The Bioruptor® uses a unique system to uniformely process multiple samples in sealed tubes of 0.5 ml to 50 ml capacity. The built-in cooling system (water cooler and Single Cycle Valve) ensures high precision temperature control resulting in higher quality samples. An excellent device for shearing chromatin, cell and tissue disruption and many other applications (see below).
TESTIMONIALTo expedite the larger-scale phenotyping of pollen number difference within Arabidopsis family, we have modified an existing method more suitable for our purpose of pollen counting using a Bioruptor®. We grew four plants per genotype. Three flower buds per plant were harvested and dried at 65°C overnight. We collected flower buds with mature pollen, but before the anthers were opened (flower stage 13). We did not use the first and second flowers of the inflorescence, as they tend to show developmentally immature flower morphologies. 30 μl of 5% Tween-20 is added to the dried flower and samples are sonicated using the Bioruptor® Plus with high power mode for 10 cycles (sonication cycle: 30 sec ON, 30 sec OFF) to separate pollen grains from the anthers. Then, all pollen solutions are measured with a cell counter.
Misako Yamazaki, Evolutionary and Ecological Genomics (Kentaro Shimizu group), Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Switzerland
B01020001 - Bioruptor Plus® device with 1.5 ml (6 samples) tube holder & temperature controlled system (water cooler + single cycle valve) for recommended sample volume 100 µl - 300 µl
B01020002 - Bioruptor Plus® device with 1.5 ml (6 samples) and 15 ml tube holders & temperature controlled system (water cooler + single cycle valve) for recommended sample volume 100 µl - 2 ml
B01020003 - Bioruptor Plus® device with 0.5 ml (12 samples) tube holder & temperature controlled system (water cooler + single cycle valve) for recommended sample volume 50 µl - 100 µl
It is important to establish optimal conditions to shear crosslinked chromatin to get the correct fragment sizes needed for ChIP. Usually this process requires both optimizing sonication conditions as well as optimizing SDS concentration, which is laborious. With the Chromatin Shearing Optimization Kits, optimization is fast and easy - we provide optimization reagents with varying concentrations of SDS. Moreover, our Chromatin Shearing Optimization Kits can be used for the optimization of chromatin preparation with our kits for ChIP.
| Chromatin Shearing Kit Low SDS (for Histones) | Chromatin Shearing Kit Low SDS (for TF) | Chromatin Shearing Kit High SDS | Chromatin Shearing Kit (for Plant) | |
|
SDS concentration |
< 0.1% |
0.2% |
1% |
0.5% |
|
Nuclei isolation |
Yes |
Yes |
No |
Yes |
|
Allows for shearing of... cells/tissue |
100 million cells |
100 million cells |
100 million cells |
up to 25 g of tissue |
|
Corresponding to shearing buffers from |
We use the Bioruptor sonication device and the antibody against the histone modification H3K4me3 in our lab. The Bioruptor device is used for the shearing of chromatin in ChIP-Seq experiments and for generation of protein lysates (whole cell extracts). Thanks to the Bioruptor device we achieve excellent and reproducible results in both applications. The H3K4me3 antibody is used in our ChIP-Seq experiments as well as Western Blotting. With this antibody we are able to generate highly enriched ChIP-Seq samples with extremely low background. In Western Blot we can detect one specific, strong band with the H3K4me3 antibody.
Diagenode provides not only very good products for research but also an excellent customer support.
Dr Lora Dimitrova, Charité-Universitätsmedizin Berlin, Germany
| Activity Test - Procedure for immunoprecipitation of native chromatin proteins Proteins play role in almost all cellular processes, and the study of their activity is crucial f... | Download |
| Bacterial Cell Disruption using Bioruptor® Standard, Plus or XL For cell lysis, we highly recommend using 1.5 ml TPX microtubes (Cat. No. C30010010) or 10 ml tub... | Download |
| ChIP - Just 4 steps to foolproofing fragmentation for ChIP using Bioruptor® Standard, Plus or Pico Just follow these four steps for shearing chromatin, and you’ll be well on your way to exce... | Download |
| ChIP - The Ultimate Guide for Chromatin Shearing Optimization with Bioruptor® Standard and Plus A review of the critical points for chromatin shearing. | Download |
| Chromatin shearing from tissue protocol using Diagenode’s Chromatin shearing optimization kit - Low SDS and Bioruptor® Standard, Plus or Pico This protocol describes the chromatin preparation from fresh or frozen tissues. The isolated chro... | Download |
| Chromatin Shearing in Yeast Cells with Bioruptor® Standard and Plus Standard procedure to shear Chromatin from Yeast. | Download |
| DNA Shearing for Bioruptor® Standard and Plus For DNA shearing we highly recommend to use the tube holder for 0.5/0.65 ml tubes (Cat. No. UCD-p... | Download |
| FFPE DNA extraction protocol using the Bioruptor® The number of archival formalin-fixed paraffin embedded (FFPE) samples is in the millions, provid... | Download |
| Mass Spectrometry – Using the Bioruptor® to lyse C. Elegans for biochemical and proteomics analysis Prasad Kasturi and F Ulrich Hartl from the Department of Cellular Biochemistry at the Max Planck ... | Download |
| Mass-Spectrometry: procedure for shotgun proteomics Mass Spectrometry is the preferred method for the sequencing and characterization of proteins. Sh... | Download |
| Protein extraction from Tissues and Cultured Cells using Bioruptor® Standard & Plus Protein extraction from tissues and cultured cells is the first step for many biochemical and ana... | Download |
| RNA extraction from tissue using Bioruptor® (Standard/Plus) and RNA extraction kit Isolation of intact RNA is essential for many techniques used in gene expression analysis. Effici... | Download |
| TAP-TAG - Procedure for the purification of a chromatin protein with Bioruptor® The Tandem Affinity Purification (TAP) is a general procedure for the purification of protein com... | Download |
| Western Blot - Procedure for simultaneous extraction of cytoplasmic, nuclear and chromatin protein with Bioruptor® The regular protocol for the extraction of histone requires an acid extraction, making impossible... | Download |
| Name | Catalog number | Throughput |
| 0.5/0.65 ml tube holder | B01200043 | 12 samples |
| 1.5 ml tube holder | B01200011 | 6 samples |
| 10 ml tube holder | B01200012 | 6 samples |
| 15 ml sonication accessories | B01200016 | 6 samples |
| 15 ml tube holder | B01200013 | 6 samples |
| 50 ml tube holder | B01200014 | 3 samples |
| Name | Catalog Number |
| 0.5 ml Bioruptor Plus Microtubes | C30010013 |
| 1.5 ml Bioruptor Plus TPX microtubes | C30010010 |
| 10 ml Bioruptor Plus tubes | C30010012 |
| 15 ml Bioruptor Plus TPX tubes | C30010009 |
| Optimizing DNA Shearing for Next Generation Sequencing Library Preparation with the Bioruptor® POSTER The rapid adoption of next-generation, direct, and single- molecule sequencing technologies has m... | Download |
| Which tubes for which Bioruptor®? QUICK GUIDE Diagenode tubes were developed specifically for use with the Bioruptor®. They ensure a maximu... | Download |
| Bacterial Cell Disruption using Bioruptor® Plus APPLICATION NOTE Disruption of bacterial cells is required for releasing biological molecules from within ... | Download |
| Bioruptor® NGS: Unbiased DNA shearing for Next-Generation Sequencing CASE STUDY Wouter Coppieters, PhD, and his colleagues operate the genomics core facility at the GIGA center,... | Download |
| LC-MS measurement of whole-body uptake of pharmaceuticals in zebrafish using the Bioruptor® Plus for sample preparation APPLICATION NOTE The laboratory for Pharmaceutical Analysis at KU Leuven is developing innovative separation and d... | Download |
| Spatial tissue proteomics of FFPE specimen using the Bioruptor® for sample preparation APPLICATION NOTE Thanks to the excellent preservation of morphological features, formalin fixed and paraffin embed... | Download |
| Standardizing seeding experiments using the Bioruptor® for the understanding of the neuronal alpha-synuclein pathology APPLICATION NOTE Dr. Kelvin Luk’s lab at the University of Pennsylvania focuses on understanding Parkinson&r...; | Download |
| Datasheet of Bioruptor tubes DATASHEET Datasheet of Diagenode tubes for Bioruptor Pico and Bioruptor Plus. | Download |
| Chromatin shearing with the Bioruptor Plus MANUAL | Download |
| Critical steps for Bioruptor® maintenance and efficient shearing DOCUMENT | Download |
| Bioruptor® Plus manual MANUAL Diagenode’s Bioruptor® Plus uses a gentle method of sonication to retain the integrity ... | Download |
How to properly cite our product/service in your workWe strongly recommend using this: Bioruptor® Plus sonication device (Hologic Diagenode Cat# B01020014). Click here to copy to clipboard. Using our products or services in your publication? Let us know! |
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